Pyrimidine is an aromatic heterocyclic organic compound similar to pyridine. One of the three diazines (six-membered heterocyclics with two nitrogen atoms in the ring), it has the nitrogen atoms at positions 1 and 3 in the ring. 554-01-8, formula is C5H7N3O, Name is 4-Amino-5-methylpyrimidin-2(1H)-one. The pyrimidine ring system has wide occurrence in nature as substituted and ring fused compounds and derivatives, including the nucleotides cytosine, thymine and uracil, thiamine (vitamin B1) and alloxan. Recommanded Product: 4-Amino-5-methylpyrimidin-2(1H)-one.
Sun, Lin;Yan, Jingli;Liu, Yilin;Wang, Ruipeng;Cheng, Yongqiang research published 《 Chemical oxidation-free site-specific 5-hydroxymethylcytosine assay》, the research content is summarized as follows. 5-Hydroxymethylcytosine (5hmC) shows a very close correlation with various diseases. Accurate quantification of 5hmC is of great significance for revealing its function in different tissues. Here we proposed a chem. oxidation-free and site-specific 5hmC assay. First, T4 β-glucosyltransferase (T4 β-GT) and AbaSI restriction endonuclease were used to cleave the double-strand DNA at the 3′ end side away from the 5hmC to produce the sticky end. Then, a hairpin probe was ligated to the sticky end of target 5hmC as an adapter. Finally, polymerase chain reaction (PCR) amplification was employed to amplify the ligation products to achieve a high sensitivity determination of target 5hmC. The selectivity of the resulting assay is up to 4000-fold and 540-fold to distinguish 5hmC from cytosine (C) and 5-methylcytosine (5mC), resp. The detection limit of the proposed 5hmC assay is 0.89 fM. This method can detect not only the content of site-specific 5hmC but also the percentage of site-specific 5hmC.
Recommanded Product: 4-Amino-5-methylpyrimidin-2(1H)-one, 5-Methylcytosine is a methylated form of the nucleobase cytosine occurring predominantly in cytosine-phosphate-guanine (CpG) islands that are produced by DNA methyltransferases and may regulate gene expression. Like cytosine, the DNA sequence containing 5-methylcytosine (5-mC) is able to be replicated without error and 5-mC can pair with guanine in double stranded DNA. However, DNA sequences containing a high local concentration of 5-mC may be less transcriptionally active than areas with higher ratios of unmodified cytosine.
5-Methylcytosine belongs to the class of organic compounds known as hydroxypyrimidines. These are organic compounds containing a hydroxyl group attached to a pyrimidine ring. Pyrimidine is a 6-membered ring consisting of four carbon atoms and two nitrogen centers at the 1- and 3- ring positions. 5-Methylcytosine exists as a solid, slightly soluble (in water), and a very weakly acidic compound (based on its pKa). Within the cell, 5-methylcytosine is primarily located in the cytoplasm. 5-Methylcytosine can be biosynthesized from cytosine. Outside of the human body, 5-methylcytosine can be found in tea. This makes 5-methylcytosine a potential biomarker for the consumption of this food product.
5-methylcytosine is a pyrimidine that is a derivative of cytosine, having a methyl group at the 5-position. It has a role as a human metabolite. It is a member of pyrimidines and a methylcytosine. It derives from a cytosine.
5-Methylcytosine is a nucleic acid that is found in the DNA and RNA of the cell. It is an important component of methylation, which is the process by which a methyl group is added to a molecule. This process can lead to cellular transformation, a process that can cause cancer. 5-Methylcytosine has also been shown as a molecular pathogenesis factor in infectious diseases such as HIV and herpes simplex virus type 1. The presence of 5-methylcytosine in nuclear DNA has been detected by analytical techniques such as gas chromatography/mass spectrometry (GC/MS). There are many analytical methods, including GC/MS, that can be used to detect 5-methylcytosine in cellular nuclei., 554-01-8.
Referemce:
Pyrimidine | C4H4N2 – PubChem,
Pyrimidine – Wikipedia